AI

Scalable and robust DNA-based storage via coding theory and deep learning

  • Rydning, Drjgj, Reinsel, J. & GANTZ, J. Drinking the world from edge to basic (international data company2018).

  • Meiser, LC et al. Artificial DNA applications in IT. Nat. communication. 13352 (2022).

    Mathematics Article Scientific Researcher from Google

  • Coze, L., Nivala, J Nat. Gennett priest. 20456-466 (2019).

    Mathematics Article Scientific Researcher from Google

  • Leprosy, em et al. High quality libraries of long algonokoliotides (150 Mir) through a process of controlling a new removal process. Nuclear acids are accurate. 382522-2540 (2010).

    Mathematics Article Scientific Researcher from Google

  • HECKEL, R., Mikutis, G. & Grass, RN Description of the DNA storage channel. Sci. representative. 99663 (2019).

    Mathematics Article Scientific Researcher from Google

  • Sabari, O., Yucovich, A., Shapira, G. & Yaakobi, E. RecONSTRUCTIONTHMS for DNA storage systems. Sci. representative. 14951 (2024).

    The article of the scientific researcher from Google

  • Srinivasavaradhan, SR, Gopi, S., PFister, HD & Yekhanin, S. Trellis BMA: Reintegration of encrypted tracking on IDS channels for storing DNA. in 2021 International Symposium IEEE on Information theory (ISIT) (ED. Dey, B.) 2453-2458 (IEEE, 2021); class=”c-article-references__item js-c-reading-companion-references-item” data-counter=”8.”>

    Linz, a. And others. Serial recovery symbols from multiple readings for the DNA sequence. in 2020 Information theory workshop (ITW) (ED. Dalai, M.) 1-5 (IEEE, 2021).

  • Levenshtein, VI effective rebuilding sequences from serials or separators. J. comb. theory. progress. A 93310-32 (2001).

    Article Mathscinet Math Google Scholar

  • McGRGOR, A., PRICE, E. & Vorotnikova, S. Trace RecONSTRUCTIONIONIOND. in The European symposium on algorithms (Eds Schulz, AS & Wagner, D.) 689–700 (Springer, 2014).

  • Church, GM, GAO, Y. & Kosuri, S. Generation Digital Information Storage in DNA. sciences 3371628-1628 (2012).

    Mathematics Article Scientific Researcher from Google

  • Goldman, n. And others. Towards storing practical and high capacity information, low maintenance in the made DNA. nature 49477-80 (2013).

    Mathematics Article Scientific Researcher from Google

  • Grass, RN, HECKEL, R., Puddu, M., Paunescu, D. & Stark, WJ keep the strong chemistry of digital information on DNA in silica with error correction codes. Ango. Chemical. int. Mr. Dr. 542552-2555, (2015).

    The scientific researcher from Google

  • Macwilliams, FJ & Sloane, NJA Mistake correction symbols theory Folder. 16 (Embassy, ​​1997).

  • Erlich, Y. & Zielinski, DNA Fountain allows a strong and effective storage intention. sciences 355950-954 (2017).

    Mathematics Article Scientific Researcher from Google

  • Organick, L. et al. Random arrival in storing DNA data widely. Nat. Biotechnology. 36242-248 (2018).

    Mathematics Article Scientific Researcher from Google

  • Yazdi, SMHT, Gabrys, R. & Milenkovic, O. Portable data storage and error -free. Sci. representative. 75011 (2017).

    Mathematics Article Scientific Researcher from Google

  • Wang, J. And others. Storage of high -capacity DNA data with changing algonoklotides length using a repetitive accumulation and hybrid maps. C. Biol. Engineer. 131-11 (2019).

    The article of the scientific researcher from Google

  • Chandak, S. Et al. Overcoming high nano error rates in storing DNA by integration and entertainment symbols. in ICASSP 2020 IEEE IEEEEEENEANATIONCE on Acoustics and Cleant and Signaling (ICASSP) (ED. Pérez-Neira, AI) 8822-8826 (IEEE, 2020).

  • Anavy, L., Vaknin, I. ATAR, O., Ameit, R. & Yakhini, Z. DNA storage with less synthesis courses using composite DNA letters. Nat. Biotechnology. 371237 (2019).

    The article of the scientific researcher from Google

  • Cherghchi, M. & Ribeiro, J. Overview of the Intestination Results of Snights Channels. IEEE Trans. Inf. theory 673207-3232 (2020).

    Article Mathscinet Math Google Scholar

  • QU, G., Yan, Z. & Wu, H Short. The vital form. 23BBAC336 (2022).

    Mathematics Article Scientific Researcher from Google

  • Rashtchian, C. Et al. Collect billions of readings to store DNA data. ADV. Nervousness. practical. split. 303362-3373 (2017).

    Mathematics Scientific Researcher from Google

  • Viswanathan, K. & Swaminathan, R. Reintegration of the series on the listing channels – Delete. in Brook. The nineteenth annual SIAM SIAM on the separate algorithms (ED. Teng, S.-H.) 399-408 (Industrial and Applied Mathematics Association, 2008).

  • BATU, T., Kannan, S., Khanna, S. & MCGREGOR, A. Rebuilding chains from random effects. Soda 4910-918 (2004).

    Mathscinet Math Google Scholar

  • Holden, n. in Learning theory conference Folder. 75 (Eds Bubeck, S. Et Al.) 1799-1840 (PMLR, 2018).

  • Holenstein, T., Mitzenmacher, M., Panigrahy, R. & Wieder, U. Trace RecONSTRUCTION with the possibility of constant deletion and relevant results. in Brook. The nineteenth annual SIAM SIAM on the separate algorithms (ED. Teng, S.-H.) 389-398 (Industrial and Applied Mathematics Association, 2008).

  • Nazarov, F. & Peres, Y. Trace RecONSTRUCTION with Exp (S.((N1/3)) Samples. in Brook. Annual ACM SIGACT Seminar 49 on Computing theory (Eds Hatami, H. & MCKENZIE, P.) 1042-1046 (ACM, 2017).

  • Peres, Y. & Zhai, A. Reintepse of the middle state of the deletion channel: many effects of many effects are sufficient. in 2017 annual symposium 58 IEEE on the foundations of computer science (FOCS) (ED. UMANS, C.) 228-239 (IEEEEEEECUTETY, 2017).

  • Bee, C. Et al. Search for content -based similarities in wide DNA storage systems. Nat. communication. 124764 (2021).

    Mathematics Article Scientific Researcher from Google

  • Pan, C. Et al. Store data -based two -dimensional DNA while rebuilding machine learning. Nat. communication. 132984 (2022).

    Mathematics Article Scientific Researcher from Google

  • Wolf, J. on the codes that can be derived from the tensioner product from the examination matrices. IEEE Trans. Inf. theory 11281-284 (1965).

    Article Mathscinet Math Google Scholar

  • Sabari, O. Et al. Solqc: The Oligo Synthetic Library quality control tool. Biomatic informatics 37720-722 (2021).

    Mathematics Article Scientific Researcher from Google

  • Preserving our digital heritage: Introduction to storing DNA data (DNA storage alliance, 2021).

  • GoPalan, PS et al. Reconstruction of a tumultuous polluleucleotide sequence. American patent application 15/536115 (2018).

    Mathematics Scientific Researcher from Google

  • Marcus, BH, Roth, RM, & Siegel, PH bound systems and coding for registration channels. in Introduction to coding for restricted systems (Eds Pless, V. & Huffman, WC) (Elsevier, 1998).

  • Gimpel, Al, Stark, WJ, HECKEL, R. & Grass, RN A Digital Twin to store DNA data based on the comprehensive amount of errors and biases. Nat. communication. 146026 (2023).

    The article of the scientific researcher from Google

  • Bohlin, J., Rose, B. Big data anal. 41-11 (2019).

    Mathematics Article Scientific Researcher from Google

  • WeINDEL, F., GIMPEL, AL, Grass, RN & HECKEL, R. More effective embrace errors than to avoid them restricted to storing DNA data. in 2023 59 annual Allerton Conference for Communications, Control and Computing 1-8 (IEEE, 2023).

  • Stoler, N. & Nekrutnko, A. The Embroidery of the Illumina Sequence tools. Genome fire. The vital form. 3LQab019 (2021).

    The article of the scientific researcher from Google

  • Ping, z. et al. Towards archiving practical and powerful DNA-based data using a Yin-Yang coding system. Nat. account. Sci. 2234-242 (2022).

    Mathematics Article Scientific Researcher from Google

  • Chaaykin, G., Foreman, N. Sabari, or. in The thirteenth annual workshop of non -volatile memories (2022).

  • Xiao, T. And others. Early notes help transformers a better vision. ADV. Nervousness. practical. split. 3430392-30400 (2021).

    The scientific researcher from Google

  • Chowdhury, B. & Garai, G. A review of a multiple sequence from the genetic algorithm perspective. Genome 109419-431 (2017).

    Mathematics Article Scientific Researcher from Google

  • Cholete, F. XCeption: Deep Learning with DEPTHWISE accessories. in Brook. IEEE conference on computer vision and patterns 1251-1258 (IEEE, 2017).

  • Vaswani, a. And others. Attention is all you need. ADV. Nervousness. practical. split. 30(2017).

  • Menin, JF & Nichols, NM PCR MULTIPEX using high -resolution DNA polymery (New England Piolis, 2013).

  • Zhang, J., Kobert, K., Flouri, T Biomatic informatics 30614-620 (2014).

    Mathematics Article Scientific Researcher from Google

  • Wang, Y., Zhao, Y., Bollas, A., Wang, Y. & AU, KF Nanopore Sequenceing Technology, Bioinformatics and Applications. Nat. Biotechnology. 391348-1365 (2021).

    Mathematics Article Scientific Researcher from Google

  • Bar-Lev, D., ORR, I., Sabari, O., Etzion, T Zenudo (2024).

  • Bar-Lev, D., ORR, I., Sabari, O., Etzion, T Zenudo (2024).

  • Grass, RN, HECKEL, R., Puddu, M., Paunescu, D. & Stark, WJ for “maintaining strong chemical information for digital information on DNA in silica with error correction symbols.” Zenudo (2015).

  • The grass, RN and others. Data set for “maintaining strong chemical information for digital information on DNA in silica with error correction symbols”. Zenudo (2015).

  • Bar-Lev, D., ORR, I., Sabari, O., Etzion, T Zenudo (2024).

  • Bornholt, J. et al. DNA -based archive storage system. in Brook. The twenty -first international conference for architectural support is programming and operating systems 637-649 (ACM, 2016).

  • Blawat, M. Et al. Correcting errors forward to store DNA data. Comput procedures. Sci. 801011-1022 (2016).

    Mathematics Article Scientific Researcher from Google

  • Wagner, Ra & Fischer, MJ Series Correction problem. J. ACM 21168-173 (1974).

    Article Mathscinet Math Google Scholar

  • 2025-02-21 00:00:00

    Related Articles

    Back to top button